| Files | Total | Priority 1 | Priority 2 | Priority 3 | Priority 4 | Priority 5 |
|---|---|---|---|---|---|---|
| 5 | 32 | 0 |
0 |
32 |
0 |
0 |
| Prio | File | Line | Description |
|---|---|---|---|
3 |
org.openscience.cdk.pharmacophore.PharmacophoreAngleBond | 66 | Avoid variables with short names like a2 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreAngleBond | 67 | Avoid variables with short names like b2 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreAngleBond | 68 | Avoid variables with short names like c2 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreAtom | 142 | Avoid variables with short names like o |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreAtom | 142 | Ensure you override both equals() and hashCode() |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreMatcher | 138-606 | The class 'PharmacophoreMatcher' has a Cyclomatic Complexity of 5 (Highest = 32). |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreMatcher | 338 | Avoid variables with short names like s |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreMatcher | 375-510 | Avoid really long methods. |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreMatcher | 375-510 | The method 'getPharmacophoreMolecule' has a Cyclomatic Complexity of 32. |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreMatcher | 375-510 | The method getPharmacophoreMolecule() has an NPath complexity of 437888 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreQueryAtom | 91 | Avoid variables with short names like ID |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 57-437 | The class 'PharmacophoreUtils' has a Cyclomatic Complexity of 5 (Highest = 17). |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 185-247 | The method 'writePharmacophoreDefinition' has a Cyclomatic Complexity of 10. |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 191 | The String literal "description" appears 4 times in this file; the first occurrence is on line 191 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 217 | The String literal "lower" appears 4 times in this file; the first occurrence is on line 217 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 218 | The String literal "upper" appears 4 times in this file; the first occurrence is on line 218 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 262 | Avoid variables with short names like e |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 271 | Avoid variables with short names like e |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 277 | Avoid variables with short names like id |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 286 | Avoid variables with short names like e |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 308-359 | The method 'processDistanceConstraint' has a Cyclomatic Complexity of 13. |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 308-359 | The method processDistanceConstraint() has an NPath complexity of 1440 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 333 | The String literal "Referring to a non-existant group definition" appears 5 times in this file; the first occurrence is on line 333 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 351 | Avoid variables with short names like a1 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 351 | Avoid variables with short names like a2 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 361-426 | The method 'processAngleConstraint' has a Cyclomatic Complexity of 17. |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 361-426 | The method processAngleConstraint() has an NPath complexity of 15552 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 413 | Avoid variables with short names like a1 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 413 | Avoid variables with short names like a2 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 414 | Avoid variables with short names like a3 |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 428 | Avoid variables with short names like id |
3 |
org.openscience.cdk.pharmacophore.PharmacophoreUtils | 428 | Avoid variables with short names like q |
Generated by PMD 4.2.2 on 2008-11-20 - 12:29:43.